MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0 Koichiro Tamura,*  Joel Dudley,* Masatoshi Nei,à and Sudhir Kumar§* *Center for Evolutionary Functional Genomics, The Biodesign Institute, Ar

Source URL: www.megasoftware.net

• Computational phylogenetics
• Bioinformatics
• Phylogenetics
• Markov models
• Masatoshi Nei
• Sequence alignment
• Substitution model
• Phylogenetic tree
• Models of DNA evolution
• Nucleic acid sequence
• MEGA
• Molecular Evolutionary Genetics Analysis
• Nucleotide diversity

Molecular Ecology, 2941–2951 doi: j.1365-294Xx Population structure of the pumpkin fruit fly Bactrocera depressa (Tephritidae) in Korea and Japan: Pliocene

Source URL: www.bio.sdsu.edu

• Population genetics
• Molecular evolution
• Phylogenetics
• Genetic genealogy
• Haplotype
• Molecular phylogenetics
• Genetic variation
• Molecular clock

302 IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOL. 2,

Source URL: msoar.cs.ucr.edu

• Genomics
• Evolutionary biology
• Phylogenetics
• Genetics
• Homology
• Inparanoid
• Gene
• Comparative genomics
• Minimal genome
• Molecular evolution
• Bioinformatics
• Genome

Molecular Phylogenetics and Evolution Vol. 23, No. 1, April, pp. 37– 42, 2002 doi:mpev, available online at http://www.idealibrary.com on A Phylogenetic Analysis of Cordyliformes (Reptilia: Squamata):

Source URL: www.francoandreone.it

Reconciling molecular phylogenies with the fossil record Hélène Morlona,b,1, Todd L. Parsonsb, and Joshua B. Plotkinb a Center for Applied Mathematics, Ecole Polytechnique, 91128 Palaiseau, France; and bBiology Depart

Source URL: www.biologie.ens.fr

• Biology
• Evolutionary biology
• Phylogenetics
• Molecular evolution
• Evolution
• Speciation
• Computational phylogenetics
• Molecular clock
• Coalescent theory
• Molecular phylogenetics
• Extinction
• Macroevolution

Molecular Phylogenetics and Evolution–322 www.elsevier.com/locate/ympev Recurrent ecological adaptations revealed through a molecular analysis of the secretive cophyline frogs of Madagascar Franco Andreon

Source URL: www.francoandreone.it

Molecular Phylogenetics and Evolution xxxxxx–xxx Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev

Source URL: www.willamette.edu

Comparative Methods for the Analysis of Gene-Expression Evolution: An Example Using Yeast Functional Genomic Data Todd H. Oakley,* 1 Zhenglong Gu,* Ehab Abouheif, 3 Nipam H. Patel, 2 and Wen-Hsiung Li* *Ecology and Ev

Source URL: biology.mcgill.ca

• Biology
• Gene expression
• Molecular genetics
• Molecular evolution
• Mutation
• Phylogenetics
• Ridge
• Phylogenetic comparative methods
• Gene regulatory network
• Evolution by gene duplication
• Bioinformatics
• Gene duplication

Molecular Phylogenetics and Evolution–71 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev

Source URL: evoinformatics.eu

Molecular Phylogenetics and Evolution Vol. 17, No. 1, October, pp. 58 –75, 2000 doi:mpev, available online at http://www.idealibrary.com on Slicing Hyperdimensional Oranges: The Geometry of Phylogenet

Source URL: www.cmi.univ-mrs.fr